MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
19428wG2_WT2a
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 412
bases: 1,521,208 bps
CDS: 1,390
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 1,456
Total number of protein coding genes annotated/found:
1,390
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5020|JADGKU010000100.1
SEQF5020_00001
Genome Viewer
NA
AA
429/143
21-449
GMP synthase [glutamine-hydrolyzing]
SEQF5020|JADGKU010000102.1
SEQF5020_00002
Genome Viewer
NA
AA
498/166
12-509
3-isopropylmalate dehydratase large subunit
SEQF5020|JADGKU010000103.1
SEQF5020_00003
Genome Viewer
NA
AA
519/173
7-525
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
SEQF5020|JADGKU010000106.1
SEQF5020_00004
Genome Viewer
NA
AA
513/171
513-1
Succinate-semialdehyde dehydrogenase [NADP(+)]
SEQF5020|JADGKU010000108.1
SEQF5020_00005
Genome Viewer
NA
AA
315/105
362-48
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00007
Genome Viewer
NA
AA
309/103
452-760
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00008
Genome Viewer
NA
AA
1899/633
945-2843
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
SEQF5020|JADGKU010000010.1
SEQF5020_00009
Genome Viewer
NA
AA
1122/374
2830-3951
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00010
Genome Viewer
NA
AA
489/163
3923-4411
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
SEQF5020|JADGKU010000010.1
SEQF5020_00011
Genome Viewer
NA
AA
669/223
4490-5158
TVP38/TMEM64 family inner membrane protein YdjZ
SEQF5020|JADGKU010000010.1
SEQF5020_00012
Genome Viewer
NA
AA
561/187
5167-5727
TVP38/TMEM64 family inner membrane protein YdjZ
SEQF5020|JADGKU010000010.1
SEQF5020_00013
Genome Viewer
NA
AA
486/162
6017-6502
N5-carboxyaminoimidazole ribonucleotide mutase
SEQF5020|JADGKU010000010.1
SEQF5020_00014
Genome Viewer
NA
AA
1131/377
6489-7619
N5-carboxyaminoimidazole ribonucleotide synthase
SEQF5020|JADGKU010000010.1
SEQF5020_00015
Genome Viewer
NA
AA
3759/1253
7612-11370
Phosphoribosylformylglycinamidine synthase
SEQF5020|JADGKU010000010.1
SEQF5020_00016
Genome Viewer
NA
AA
720/240
11491-12210
Phosphoribosylaminoimidazole-succinocarboxamide synthase
SEQF5020|JADGKU010000010.1
SEQF5020_00017
Genome Viewer
NA
AA
1479/493
12213-13691
Amidophosphoribosyltransferase
SEQF5020|JADGKU010000010.1
SEQF5020_00018
Genome Viewer
NA
AA
1029/343
13691-14719
Phosphoribosylformylglycinamidine cyclo-ligase
SEQF5020|JADGKU010000010.1
SEQF5020_00019
Genome Viewer
NA
AA
573/191
14709-15281
Phosphoribosylglycinamide formyltransferase
SEQF5020|JADGKU010000010.1
SEQF5020_00020
Genome Viewer
NA
AA
1116/372
15420-16535
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00021
Genome Viewer
NA
AA
792/264
17415-16624
Zinc transporter ZupT
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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